Arriba
nf-core/modules/arriba-arriba
Detect gene fusions from chimeric STAR alignments with Arriba (builds a STAR index and aligns reads first).
nf-core
模块
v1.0.0
结构
reads1
reads2
fasta
gtf
→
Arriba
→
outdir
fusions
输入
reads1(file, 必填)
Forward RNA-seq reads FASTQ (.fastq.gz).
reads2(file, 必填)
Reverse RNA-seq reads FASTQ (.fastq.gz).
fasta(file, 必填)
Reference FASTA file.
gtf(file, 必填)
Reference GTF annotation.